Department of Computer Science

  1. University
  2. Faculties
  3. Faculty of Applied Computer Science
  4. Institute of Computer Science
  5. Chairs and Professors
  6. Chair of Biomedical Informatics, Data Mining and Data Analytics
  7. Staff
  8. Jürgen Stachon

Jürgen Stachon

Research Assistant
Lehrstuhl für Biomedizinische Informatik, Data Mining und Data Analytics
Phone: (+49) 0821 - 598 - 3133
Email:
Room: 9003 (BCM)
Address: Alter Postweg 101 (Büro Center Messe), 86159 Augsburg

RESEARCH INTERESTS

  • epigenetics targeting especially towards methylation programming mechanisms during cellular differentiation or development
  • development and implementation of "succinct" large-scale data structures and subsequent algorithmics hereon being the backbone of bioinformatics; main interest points/experiences with 1) most diverse variants of compressed suffix tree representations (on genomic collections) for text indexing and variant-adapted downstream string algorithmics 2) succinct representations of (colored) DeBruijn-structures for genome assembly and sequence specifity-preserving indexing/variant representation on genomic-collections AND related structures
  • master thesis targeted towards succinct data structures for indexing large-scale genomic collections predominantly in a relatively compressed, suffix tree based manner
  • resource aware and compression algorithmics in general

ACADEMIC POSITIONS

  • Since 2025: Research assistant at the Chair of Biomedical Informatics, Data Mining and Data Analytics

EDUCATION

  • 2021-2024: M.Sc. Medical information sciences, University of Augsburg    
  • 2018-2021: B.Sc. Medical Information Sciences, University of Augsburg  

Search